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Swedish Research Council (VR) · 2025–2029

Evolution of protein domain architectures in the AI era

Structure-aware analysis of domain rearrangements and structural change using AlphaFoldDB, TED, and ECOD.

Knut and Alice Wallenberg Foundation · 2023–2029

Learning the molecular language of the cell

Deep-learning methods for proteoforms, protein-protein interactions, and large protein complexes.

SeRC · 2023–2027

Development of E-science tools to study proteins

Method and infrastructure development for computational protein science.

Strategic research environment · Funded

CEMERAI

Center for Modelling Life at the Membrane with AI, where Arne Elofsson is co-director and co-leads the theme on comparative and predictive modelling of diverse cell membranes.

DDLS · 2025-2029

Industry DDLS PhD student in Cell and Molecular Biology

Collaboration with Cytiva on AI-based development of protein binders.

DDLS · 2026-2030

DDLS PhD student in Evolution and Biodivesity

Evolution of protein domain architectures in the AI-era.

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Learning the molecular language of the cell
A funded direction combining long-read transcriptomics, proteomics, deep learning, and structural modelling to describe proteoforms and molecular systems.
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Evolution of protein domain architectures in the AI era
Structure-aware evolutionary analysis across AlphaFoldDB-scale domain data provides a new route to study how protein architectures emerge and diversify.